Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21880 | Not Available | Positive | 4713860 - 4715155 | 46216.4 |
| hypothetical protein | APR52_21885 | A7MJM0 | Negative | 4715152 - 4715958 | 29546.1 |
| udp-2,3-diacylglucosamine hydrolase | APR52_21890 | Q7NT75 | Negative | 4715973 - 4716749 | 28390.6 |
| cyclophilin | APR52_21895 | P23869 | Negative | 4716775 - 4717287 | 18338.8 |
| peptidylprolyl isomerase | APR52_21900 | P83221 | Negative | 4717320 - 4717862 | 19099.7 |
| hypothetical protein | APR52_21905 | Not Available | Negative | 4718019 - 4718609 | 21446.5 |
| cysteine--trna ligase | APR52_21910 | C5CPX0 | Positive | 4718861 - 4720240 | 50714.2 |
| dna-3-methyladenine glycosylase | APR52_21915 | Q92383 | Positive | 4720258 - 4720911 | 24423.6 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | APR52_21920 | B2SXP7 | Positive | 4720928 - 4721908 | 36568.6 |
| trna(ile)-lysidine synthetase | APR52_21925 | A1VRB1 | Positive | 4721928 - 4722893 | 34542.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
