Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_21775 | Not Available | Positive | 4687406 - 4688305 | 33241.9 |
| acyl-coa thioesterase | APR52_21780 | Not Available | Positive | 4688333 - 4689172 | 30148.6 |
| disulfide bond formation protein dsba | APR52_21785 | Q9X9Q7 | Positive | 4689238 - 4689831 | 21449.8 |
| enoyl-coa hydratase | APR52_21790 | Q5XIC0 | Positive | 4689869 - 4690633 | 27094.0 |
| abc transporter substrate-binding protein | APR52_21795 | Q8YC99 | Positive | 4690877 - 4691983 | 40330.2 |
| thioesterase | APR52_21800 | Q89AL4 | Negative | 4691999 - 4692427 | 15375.5 |
| metal abc transporter permease | APR52_21805 | Q9LVM1 | Positive | 4692469 - 4694313 | 67687.4 |
| hydroxyacid dehydrogenase | APR52_21810 | Q65CJ7 | Positive | 4694353 - 4695291 | 33009.7 |
| amidase | APR52_21815 | K9NBS6 | Negative | 4695298 - 4696740 | 51793.0 |
| lysr family transcriptional regulator | APR52_21820 | Not Available | Positive | 4696850 - 4697836 | 36310.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
