Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | APR52_21720 | Not Available | Negative | 4673958 - 4674845 | 32232.9 |
| oxidoreductase | APR52_21725 | P25145 | Positive | 4674974 - 4675732 | 26478.8 |
| tonb-dependent receptor | APR52_21730 | Not Available | Negative | 4675761 - 4678145 | 85906.3 |
| hypothetical protein | APR52_21735 | Not Available | Negative | 4678272 - 4679279 | 35949.7 |
| rna polymerase subunit sigma | APR52_21740 | Not Available | Negative | 4679350 - 4679862 | 18945.4 |
| tetr family transcriptional regulator | APR52_21745 | Not Available | Positive | 4680114 - 4680806 | 24843.8 |
| acyl-coa dehydrogenase | APR52_21750 | Not Available | Positive | 4680866 - 4682662 | 64765.1 |
| hypothetical protein | APR52_21755 | Not Available | Positive | 4682702 - 4683136 | 15522.6 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_21760 | O32178 | Positive | 4683261 - 4685660 | 85605.4 |
| acetyl-coa acetyltransferase | APR52_21770 | Not Available | Positive | 4686156 - 4687352 | 41394.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
