Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | APR52_21670 | Not Available | Positive | 4662058 - 4663014 | 32941.0 |
| 3-isopropylmalate dehydratase | APR52_21675 | Q8TVF2 | Positive | 4663011 - 4664285 | 45012.1 |
| 3-isopropylmalate dehydratase | APR52_21680 | O29626 | Positive | 4664282 - 4664803 | 18598.5 |
| mmge/prpd family protein | APR52_21685 | Not Available | Positive | 4664793 - 4666118 | 46133.2 |
| laci family transcriptional regulator | APR52_21690 | Not Available | Positive | 4666156 - 4667124 | 33496.9 |
| hydantoin utilization protein b | APR52_21695 | Not Available | Positive | 4667326 - 4669020 | 60156.1 |
| hydantoin utilization protein a | APR52_21700 | Q01262 | Positive | 4669017 - 4671071 | 72240.9 |
| cysteine hydrolase | APR52_21705 | Not Available | Positive | 4671068 - 4671682 | 21483.7 |
| 3-ketosteroid dehydrogenase | APR52_21710 | Not Available | Positive | 4671679 - 4673094 | 48230.4 |
| carboxyvinyl-carboxyphosphonate phosphorylmutase | APR52_21715 | Q9YFM7 | Positive | 4673091 - 4673954 | 31203.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
