Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | APR52_21620 | P0ACL3 | Negative | 4653300 - 4654007 | 26044.2 |
| oxidoreductase | APR52_21625 | Q8P3K4 | Positive | 4654127 - 4654861 | 25224.5 |
| 3-oxoacyl-acp reductase | APR52_21630 | Not Available | Positive | 4654858 - 4655610 | 25922.0 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | APR52_21635 | A9ALD1 | Positive | 4655658 - 4656506 | 30488.2 |
| gntr family transcriptional regulator | APR52_21640 | Not Available | Positive | 4656640 - 4657422 | 28839.0 |
| abc transporter substrate-binding protein | APR52_21645 | Not Available | Positive | 4657446 - 4658648 | 43417.5 |
| branched-chain amino acid abc transporter permease | APR52_21650 | Not Available | Positive | 4658710 - 4659582 | 30278.2 |
| abc transporter permease | APR52_21655 | Not Available | Positive | 4659579 - 4660556 | 33949.2 |
| abc transporter atp-binding protein | APR52_21660 | Not Available | Positive | 4660549 - 4661313 | 26733.6 |
| abc transporter atp-binding protein | APR52_21665 | Not Available | Positive | 4661310 - 4662020 | 25765.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
