Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetylglutamate kinase | APR52_21570 | A1W3L0 | Positive | 4641674 - 4642567 | 31481.3 |
| hypothetical protein | APR52_21575 | Not Available | Positive | 4642582 - 4644216 | 58984.8 |
| dihydroorotate oxidase | APR52_21580 | Q5E8M7 | Positive | 4644320 - 4644967 | 23761.5 |
| catalase | APR52_21585 | Q9Z598 | Positive | 4645089 - 4646612 | 57309.7 |
| dehydrogenase | APR52_21590 | P58409 | Negative | 4646618 - 4647679 | 37105.4 |
| gluconolactonase | APR52_21595 | Not Available | Negative | 4647683 - 4648615 | 34189.2 |
| galactonate dehydratase | APR52_21600 | P42240 | Negative | 4648629 - 4650155 | 53627.8 |
| abc transporter permease | APR52_21605 | Q9KR66 | Negative | 4650158 - 4651555 | 49941.8 |
| abc transporter permease | APR52_21610 | Not Available | Negative | 4651583 - 4652140 | 21080.8 |
| abc transporter substrate-binding protein | APR52_21615 | Not Available | Negative | 4652234 - 4653244 | 36800.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
