Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| group 1 glycosyl transferase | APR52_21520 | Not Available | Positive | 4628768 - 4630618 | 69655.5 |
| sugar abc transporter atp-binding protein | APR52_21525 | Q56903 | Negative | 4630655 - 4631377 | 25824.2 |
| abc transporter | APR52_21530 | Q56902 | Negative | 4631384 - 4632190 | 30860.5 |
| mannose-1-phosphate guanyltransferase | APR52_21535 | P0C7J3 | Negative | 4632187 - 4633605 | 51475.2 |
| glycosyl transferase family 2 | APR52_21540 | Not Available | Positive | 4633861 - 4635717 | 68791.5 |
| hypothetical protein | APR52_21545 | P55465 | Positive | 4635879 - 4637615 | 63533.1 |
| glycosyl transferase family 2 | APR52_21550 | Not Available | Positive | 4637612 - 4638640 | 38243.1 |
| glycosyl transferase family 2 | APR52_21555 | Q1RIM7 | Positive | 4638644 - 4639702 | 39229.4 |
| glycosyl transferase | APR52_21560 | Not Available | Negative | 4639716 - 4640474 | 28439.4 |
| glycosyl transferase | APR52_21565 | A0R211 | Positive | 4640518 - 4641615 | 40299.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
