Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | APR52_21470 | B0RVL0 | Positive | 4616426 - 4617496 | 39822.9 |
| dtdp-4-dehydrorhamnose reductase | APR52_21475 | P37760 | Positive | 4617493 - 4618383 | 32103.2 |
| glucose-1-phosphate thymidylyltransferase | APR52_21480 | P37744 | Positive | 4618432 - 4619331 | 32729.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | APR52_21485 | Q9HU21 | Positive | 4619328 - 4619876 | 20377.1 |
| hypothetical protein | APR52_21490 | Not Available | Negative | 4619895 - 4621349 | 54681.0 |
| hypothetical protein | APR52_21495 | Not Available | Negative | 4621336 - 4622571 | 45644.7 |
| gdp-mannose 4,6 dehydratase | APR52_21500 | Q9JRN5 | Negative | 4622690 - 4623730 | 38949.7 |
| hypothetical protein | APR52_21505 | P0A5A0 | Positive | 4624411 - 4626327 | 69102.9 |
| hypothetical protein | APR52_21510 | Not Available | Positive | 4626324 - 4627472 | 43500.0 |
| gdp-fucose synthetase | APR52_21515 | P32055 | Positive | 4627531 - 4628487 | 35424.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
