Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | APR52_21420 | P0ACA8 | Negative | 4605783 - 4606424 | 24366.0 |
| phzf family phenazine biosynthesis protein | APR52_21425 | Not Available | Negative | 4606458 - 4607291 | 28604.2 |
| lysine transporter lyse | APR52_21430 | A4WB82 | Negative | 4607302 - 4607940 | 22379.2 |
| 2-aminoadipate aminotransferase | APR52_21435 | Not Available | Negative | 4607966 - 4609168 | 42905.0 |
| multidrug dmt transporter permease | APR52_21440 | Not Available | Negative | 4609245 - 4610189 | 33091.5 |
| lysine transporter lyse | APR52_21445 | Q57L56 | Negative | 4610197 - 4610796 | 21369.8 |
| gntr family transcriptional regulator | APR52_21450 | H3ZPL1 | Positive | 4610897 - 4612339 | 52840.8 |
| hypothetical protein | APR52_21455 | Not Available | Positive | 4612410 - 4613186 | 27105.0 |
| hypothetical protein | APR52_21460 | Not Available | Positive | 4613227 - 4614504 | 44365.7 |
| amino acid dehydrogenase | APR52_21465 | Q479B1 | Negative | 4614653 - 4615960 | 47599.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
