Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21370 | P27017 | Positive | 4596535 - 4597653 | 39749.3 |
| hypothetical protein | APR52_21375 | Not Available | Positive | 4597653 - 4598276 | 23194.1 |
| hypothetical protein | APR52_21380 | Q9FR37 | Positive | 4598357 - 4599394 | 35736.8 |
| transposase | APR52_21385 | P37007 | Negative | 4599521 - 4600651 | 42587.4 |
| 3-oxoacyl-acp reductase | APR52_21390 | C0KTJ6 | Negative | 4600823 - 4601620 | 27186.0 |
| creatininase | APR52_21395 | Not Available | Positive | 4601685 - 4602512 | 28531.2 |
| hypothetical protein | APR52_21400 | P55664 | Negative | 4602541 - 4603506 | 34233.8 |
| lysine transporter lyse | APR52_21405 | P0AG36 | Negative | 4603512 - 4604144 | 22357.1 |
| hypothetical protein | APR52_21410 | Not Available | Negative | 4604146 - 4604838 | 24535.5 |
| phenazine biosynthesis protein phzf | APR52_21415 | P38765 | Negative | 4604856 - 4605779 | 32333.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
