Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21320 | Not Available | Negative | 4586288 - 4587004 | 26276.9 |
| lysr family transcriptional regulator | APR52_21325 | Not Available | Negative | 4587083 - 4587988 | 32492.2 |
| sugar dehydrogenase | APR52_21330 | P39640 | Positive | 4588103 - 4588876 | 26594.8 |
| abc transporter substrate-binding protein | APR52_21335 | Not Available | Positive | 4589178 - 4590425 | 44460.8 |
| abc transporter permease | APR52_21340 | Not Available | Positive | 4590438 - 4591304 | 29427.9 |
| branched-chain amino acid permease/abc transporter atp-binding protein | APR52_21345 | A1WXT0 | Positive | 4591324 - 4593171 | 64490.1 |
| abc transporter atp-binding protein | APR52_21350 | Not Available | Positive | 4593155 - 4593850 | 24782.2 |
| hypothetical protein | APR52_21355 | Q3M5Q6 | Positive | 4593894 - 4594904 | 37400.1 |
| hypothetical protein | APR52_21360 | Not Available | Positive | 4594907 - 4595122 | 7568.04 |
| hypothetical protein | APR52_21365 | Q0KFF8 | Positive | 4595109 - 4596545 | 49229.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
