Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | APR52_21265 | Not Available | Negative | 4567473 - 4568258 | 27657.8 |
| protein mbth | APR52_21270 | P59965 | Negative | 4568587 - 4568787 | 7319.58 |
| udp-glucuronosyltransferase | APR52_21275 | Q8KHE4 | Negative | 4568824 - 4570137 | 46883.4 |
| non-ribosomal peptide synthetase | APR52_21280 | P45745 | Negative | 4570148 - 4577653 | 270712.0 |
| hypothetical protein | APR52_21285 | Not Available | Negative | 4578101 - 4578760 | 23722.8 |
| hypothetical protein | APR52_21290 | Not Available | Negative | 4578824 - 4579762 | 33230.4 |
| mfs transporter | APR52_21295 | O31444 | Negative | 4579780 - 4581018 | 42864.9 |
| hypothetical protein | APR52_21300 | Q9LG41 | Negative | 4581042 - 4582874 | 67888.1 |
| hypothetical protein | APR52_21305 | Not Available | Positive | 4583056 - 4583721 | 24460.5 |
| hypothetical protein | APR52_21310 | Not Available | Negative | 4583742 - 4584290 | 20313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
