Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21215 | Not Available | Negative | 4557149 - 4558096 | 34515.2 |
| receptor | APR52_21220 | Not Available | Positive | 4558200 - 4559177 | 34458.7 |
| 2-methylcitrate dehydratase | APR52_21225 | Not Available | Positive | 4559229 - 4560605 | 48785.3 |
| 3-isopropylmalate dehydrogenase | APR52_21230 | Q72IW9 | Positive | 4560619 - 4561704 | 38885.6 |
| zinc-binding alcohol dehydrogenase | APR52_21235 | Q5KTM9 | Positive | 4561752 - 4562714 | 33080.2 |
| hypothetical protein | APR52_21240 | Not Available | Negative | 4562718 - 4563071 | 12367.8 |
| hypothetical protein | APR52_21245 | Not Available | Negative | 4563068 - 4563622 | 20007.5 |
| hypothetical protein | APR52_21250 | Q99RJ0 | Negative | 4563819 - 4565258 | 53177.8 |
| hypothetical protein | APR52_21255 | P0A4I7 | Negative | 4565331 - 4566740 | 51853.8 |
| two-component system response regulator | APR52_21260 | Q44006 | Negative | 4566752 - 4567432 | 25051.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
