Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21165 | Not Available | Positive | 4547197 - 4548726 | 53737.0 |
| laci family transcriptional regulator | APR52_21170 | Not Available | Negative | 4548966 - 4549928 | 33333.3 |
| 2-pyrone-4,6-dicarboxylate hydrolase | APR52_21175 | Not Available | Negative | 4549925 - 4550827 | 32252.1 |
| formyl-coa transferase | APR52_21180 | Not Available | Negative | 4550827 - 4551984 | 42122.3 |
| hypothetical protein | APR52_21185 | Not Available | Negative | 4551993 - 4552967 | 33762.0 |
| citryl-coa lyase | APR52_21190 | Not Available | Negative | 4552999 - 4553868 | 30260.4 |
| lysr family transcriptional regulator | APR52_21195 | Not Available | Positive | 4553945 - 4554820 | 31565.7 |
| hypothetical protein | APR52_21200 | Not Available | Negative | 4554861 - 4555112 | 8538.68 |
| histidine kinase | APR52_21205 | Q06904 | Negative | 4555109 - 4556239 | 41250.6 |
| sigma factor sigb regulation protein rsbq | APR52_21210 | O07015 | Negative | 4556236 - 4557057 | 29326.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
