Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_21115 | Not Available | Negative | 4536776 - 4537534 | 27317.3 |
| peptidoglycan-binding protein | APR52_21120 | Not Available | Positive | 4537775 - 4538569 | 28035.5 |
| hypothetical protein | APR52_21125 | Not Available | Positive | 4538582 - 4540153 | 57850.4 |
| amidase | APR52_21130 | Not Available | Negative | 4540177 - 4540788 | 22556.8 |
| hypothetical protein | APR52_21135 | Not Available | Negative | 4540897 - 4541823 | 33892.8 |
| hypothetical protein | APR52_21140 | Not Available | Positive | 4542131 - 4543285 | 41312.6 |
| hypothetical protein | APR52_21145 | Not Available | Negative | 4543313 - 4544218 | 33319.8 |
| hypothetical protein | APR52_21150 | Not Available | Positive | 4544521 - 4545336 | 29596.3 |
| hypothetical protein | APR52_21155 | Not Available | Negative | 4545358 - 4546545 | 42193.6 |
| tripartite tricarboxylate transporter tctb | APR52_21160 | Not Available | Positive | 4546761 - 4547186 | 15138.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
