Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_01430 | Q0AVM1 | Positive | 310918 - 311694 | 28129.1 |
| hypothetical protein | APR52_01435 | Not Available | Positive | 311735 - 312706 | 34153.4 |
| hypothetical protein | APR52_01440 | Not Available | Positive | 312703 - 313893 | 43964.9 |
| hypothetical protein | APR52_01445 | Not Available | Positive | 314284 - 317418 | 110308.0 |
| d-aminoacylase | APR52_01450 | P72349 | Negative | 317459 - 318901 | 50878.4 |
| mfs transporter | APR52_01455 | Not Available | Negative | 318901 - 319893 | 34611.0 |
| hypothetical protein | APR52_01460 | Not Available | Positive | 319989 - 320924 | 33134.1 |
| phosphoglycolate phosphatase | APR52_01465 | Q9A5Z2 | Positive | 322083 - 322808 | 25021.1 |
| protein tyrosine phosphatase | APR52_01470 | Not Available | Positive | 322937 - 323431 | 18365.1 |
| hypothetical protein | APR52_01475 | Not Available | Negative | 323441 - 324493 | 38455.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
