Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_20965 | Not Available | Positive | 4504193 - 4505188 | 34670.6 |
| hypothetical protein | APR52_20970 | A5UMN6 | Positive | 4505203 - 4506639 | 52975.7 |
| hypothetical protein | APR52_20975 | Q0I5M5 | Positive | 4506651 - 4507094 | 15982.6 |
| hypothetical protein | APR52_20980 | Not Available | Positive | 4507116 - 4507628 | 19095.3 |
| hypothetical protein | APR52_20985 | Not Available | Positive | 4507689 - 4508654 | 33568.7 |
| hypothetical protein | APR52_20990 | E4QP00 | Positive | 4508686 - 4510368 | 59088.6 |
| cytosine deaminase | APR52_20995 | O27549 | Positive | 4510365 - 4511780 | 51001.9 |
| hypothetical protein | APR52_21000 | Q1QVQ3 | Negative | 4511812 - 4513278 | 51425.5 |
| sugar abc transporter permease | APR52_21005 | Q7LYX6 | Negative | 4513292 - 4514119 | 30771.7 |
| abc transporter permease | APR52_21010 | Not Available | Negative | 4514116 - 4514997 | 32127.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
