Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_20915 | Not Available | Positive | 4493902 - 4494171 | 10469.2 |
| hypothetical protein | APR52_20920 | Not Available | Positive | 4494168 - 4494644 | 16981.9 |
| methionine abc transporter atp-binding protein | APR52_20925 | Q8VQK6 | Negative | 4494788 - 4495792 | 35780.7 |
| abc transporter permease | APR52_20930 | Not Available | Negative | 4495813 - 4496724 | 32122.6 |
| peptidase m20 | APR52_20935 | O07598 | Negative | 4496721 - 4497899 | 42610.9 |
| abc transporter permease | APR52_20940 | P94311 | Negative | 4497929 - 4498894 | 34885.7 |
| hypothetical protein | APR52_20945 | Q8X6V9 | Negative | 4498900 - 4500366 | 53869.6 |
| hypothetical protein | APR52_20950 | Not Available | Positive | 4500567 - 4501220 | 24565.6 |
| hypothetical protein | APR52_20955 | Not Available | Positive | 4501674 - 4503167 | 51806.4 |
| hypothetical protein | APR52_20960 | P0ACR7 | Negative | 4503199 - 4504080 | 32025.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
