Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline dioxygenase | APR52_20625 | Q24JN5 | Negative | 4442917 - 4443762 | 30871.8 |
| hypothetical protein | APR52_20630 | C5CRM0 | Negative | 4443803 - 4444588 | 29484.4 |
| valine--trna ligase | APR52_20635 | Q474E1 | Positive | 4444719 - 4447628 | 108888.0 |
| utp--glucose-1-phosphate uridylyltransferase | APR52_20640 | Q9I291 | Positive | 4447775 - 4448665 | 32129.0 |
| hypothetical protein | APR52_20645 | D3RPC0 | Negative | 4448743 - 4448970 | 8372.13 |
| adp-ribose pyrophosphatase | APR52_20650 | A4VLQ5 | Negative | 4448973 - 4449554 | 21515.7 |
| cysteine synthase | APR52_20655 | Q9I526 | Negative | 4449630 - 4450538 | 32719.2 |
| Trna-leu | Not Available | Not Available | Positive | 4450668 - 4450752 | Not Available |
| hypothetical protein | APR52_20855 | Not Available | Positive | 4486686 - 4487072 | 14133.6 |
| hypothetical protein | APR52_20860 | Not Available | Positive | 4488203 - 4488709 | 19044.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
