Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_20525 | Not Available | Negative | 4422931 - 4424301 | 49261.5 |
| feruloyl esterase | APR52_20530 | Not Available | Negative | 4424304 - 4426997 | 92077.2 |
| lysr family transcriptional regulator | APR52_20535 | Not Available | Positive | 4427174 - 4428106 | 33371.8 |
| abc transporter substrate-binding protein | APR52_20540 | Not Available | Positive | 4428103 - 4429098 | 35192.5 |
| hypothetical protein | APR52_20545 | Not Available | Negative | 4429126 - 4429686 | 20851.3 |
| hypothetical protein | APR52_20550 | Not Available | Negative | 4429756 - 4430034 | 10387.0 |
| hypothetical protein | APR52_20555 | Not Available | Negative | 4430057 - 4430905 | 29047.8 |
| dna polymerase iv | APR52_20560 | A3CSG3 | Positive | 4431058 - 4432248 | 43453.6 |
| hypothetical protein | APR52_20565 | Not Available | Positive | 4432253 - 4432939 | 25558.8 |
| purine nucleoside permease | APR52_20570 | Not Available | Negative | 4433167 - 4434216 | 37573.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
