Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyanate hydratase | APR52_20475 | C5CRQ4 | Negative | 4413419 - 4413862 | 16555.0 |
| histidine kinase | APR52_20480 | Not Available | Negative | 4414043 - 4414474 | 17318.2 |
| tetr family transcriptional regulator | APR52_20485 | Not Available | Positive | 4414601 - 4415209 | 21935.4 |
| lactate permease | APR52_20490 | Not Available | Negative | 4415187 - 4416848 | 58619.3 |
| lysr family transcriptional regulator | APR52_20495 | Q57083 | Positive | 4417106 - 4417990 | 32436.1 |
| lactate dehydrogenase | APR52_20500 | Q4ZY06 | Positive | 4418171 - 4419328 | 41986.8 |
| alpha-ketoglutarate permease | APR52_20505 | Not Available | Positive | 4419480 - 4420820 | 48174.4 |
| hypothetical protein | APR52_20510 | Not Available | Positive | 4420990 - 4421472 | 18315.7 |
| hypothetical protein | APR52_20515 | Not Available | Positive | 4421469 - 4421699 | 8441.51 |
| hypothetical protein | APR52_20520 | Not Available | Negative | 4421898 - 4422890 | 34675.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
