Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_20420 | Not Available | Negative | 4401600 - 4401914 | 10781.3 |
| porin | APR52_20425 | Not Available | Negative | 4401989 - 4403146 | 40056.5 |
| hypothetical protein | APR52_20430 | Not Available | Positive | 4403324 - 4403995 | 24974.5 |
| outer membrane protein assembly factor bama | APR52_20435 | Q9K1H0 | Positive | 4404061 - 4406460 | 87983.4 |
| two-component system response regulator | APR52_20440 | P69229 | Positive | 4406466 - 4407149 | 24701.8 |
| hypothetical protein | APR52_20445 | Not Available | Negative | 4407153 - 4407464 | 10856.2 |
| histidine kinase | APR52_20450 | Not Available | Positive | 4407781 - 4409355 | 57658.7 |
| two-component system response regulator | APR52_20455 | Not Available | Positive | 4409363 - 4410073 | 26027.2 |
| hypothetical protein | APR52_20460 | Not Available | Negative | 4410083 - 4410865 | 27897.8 |
| aldehyde dehydrogenase | APR52_20465 | Q9I6C8 | Positive | 4410963 - 4412360 | 50977.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
