Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| esterase | APR52_01375 | Not Available | Negative | 295357 - 296148 | 27787.5 |
| hypothetical protein | APR52_01380 | Not Available | Negative | 296195 - 297202 | 34939.3 |
| hypothetical protein | APR52_01385 | Q8VWE6 | Positive | 297326 - 298213 | 32158.3 |
| hypothetical protein | APR52_01390 | Not Available | Positive | 298440 - 301535 | 112626.0 |
| hypothetical protein | APR52_01400 | Not Available | Negative | 303448 - 305094 | 58164.7 |
| hypothetical protein | APR52_01405 | Not Available | Negative | 305243 - 305788 | 20764.5 |
| tonb-dependent receptor | APR52_01410 | Q08017 | Negative | 305862 - 307865 | 73106.4 |
| hypothetical protein | APR52_01415 | Not Available | Negative | 308340 - 309311 | 35259.2 |
| rna polymerase subunit sigma | APR52_01420 | Not Available | Negative | 309308 - 309814 | 18975.1 |
| hypothetical protein | APR52_01425 | Q8X4M5 | Negative | 309925 - 310824 | 33258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
