Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde-activating protein | APR52_20370 | Not Available | Positive | 4390805 - 4391206 | 14642.4 |
| lysine transporter lyse | APR52_20375 | A6T7N0 | Positive | 4391254 - 4391880 | 22063.5 |
| hypothetical protein | APR52_20380 | Not Available | Negative | 4391885 - 4392106 | 7980.27 |
| penicillin-binding protein 1c | APR52_20385 | P38050 | Positive | 4392445 - 4394742 | 82369.9 |
| hypothetical protein | APR52_20390 | P55140 | Positive | 4394793 - 4396235 | 50768.1 |
| gntr family transcriptional regulator | APR52_20395 | O07007 | Positive | 4396336 - 4397052 | 25227.4 |
| mfs transporter | APR52_20400 | P37482 | Positive | 4397049 - 4398359 | 44366.5 |
| hypothetical protein | APR52_20405 | Not Available | Positive | 4398542 - 4398937 | 15586.6 |
| diguanylate cyclase | APR52_20410 | Q9ABX9 | Positive | 4399067 - 4401061 | 71658.0 |
| hypothetical protein | APR52_20415 | Not Available | Negative | 4401065 - 4401586 | 17597.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
