Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron dicitrate transport regulator fecr | APR52_20320 | Not Available | Negative | 4381427 - 4382401 | 34941.9 |
| rna polymerase subunit sigma | APR52_20325 | Not Available | Negative | 4382398 - 4382910 | 18971.9 |
| hypothetical protein | APR52_20330 | Not Available | Positive | 4383123 - 4384241 | 38988.4 |
| lysr family transcriptional regulator | APR52_20335 | P96194 | Positive | 4384307 - 4385224 | 33072.2 |
| hypothetical protein | APR52_20340 | Not Available | Positive | 4385369 - 4386052 | 24430.9 |
| mfs transporter | APR52_20345 | P0DPR5 | Positive | 4386094 - 4387410 | 46768.6 |
| hypothetical protein | APR52_20350 | Not Available | Positive | 4387451 - 4388137 | 24944.7 |
| amidase | APR52_20355 | Q38M35 | Positive | 4388152 - 4389498 | 46401.7 |
| acetyltransferase | APR52_20360 | Not Available | Positive | 4389825 - 4390340 | 19043.7 |
| hypothetical protein | APR52_20365 | Not Available | Positive | 4390380 - 4390658 | 10214.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
