Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_20270 | Not Available | Positive | 4371157 - 4371918 | 28304.2 |
| hypothetical protein | APR52_20275 | Not Available | Positive | 4371989 - 4372336 | 13114.5 |
| ketosteroid isomerase | APR52_20280 | Not Available | Positive | 4372476 - 4372838 | 13436.8 |
| laci family transcriptional regulator | APR52_20285 | P31766 | Negative | 4372857 - 4373885 | 36594.1 |
| oxidoreductase | APR52_20290 | Not Available | Positive | 4373955 - 4374776 | 27836.4 |
| hypothetical protein | APR52_20295 | Not Available | Positive | 4374817 - 4375794 | 33857.3 |
| long-chain fatty acid--coa ligase | APR52_20300 | Not Available | Positive | 4375799 - 4377355 | 56038.4 |
| short-chain dehydrogenase | APR52_20305 | Not Available | Positive | 4377352 - 4378086 | 25201.3 |
| citrate synthase | APR52_20310 | Not Available | Positive | 4378097 - 4378879 | 27719.8 |
| hypothetical protein | APR52_20315 | Not Available | Negative | 4378892 - 4381339 | 88820.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
