Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | APR52_20170 | O51039 | Negative | 4341585 - 4342865 | 45802.1 |
| lyttr family transcriptional regulator | APR52_20175 | P26275 | Negative | 4342862 - 4343602 | 27434.9 |
| histidine kinase | APR52_20180 | P0AD15 | Negative | 4343631 - 4344695 | 38167.8 |
| argininosuccinate lyase | APR52_20185 | C5CRT0 | Positive | 4344746 - 4346143 | 51589.4 |
| protease | APR52_20190 | Not Available | Positive | 4346177 - 4347667 | 55646.2 |
| hemolysin d | APR52_20195 | P52477 | Positive | 4347857 - 4349095 | 43000.5 |
| multidrug transporter | APR52_20200 | P52002 | Positive | 4349105 - 4352278 | 112987.0 |
| transporter | APR52_20205 | Q9KJC1 | Positive | 4352278 - 4353735 | 51180.4 |
| hypothetical protein | APR52_20210 | Not Available | Negative | 4353742 - 4355076 | 49154.3 |
| hypothetical protein | APR52_20215 | Not Available | Negative | 4355356 - 4355913 | 19018.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
