Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | APR52_20120 | A9MWE8 | Positive | 4331660 - 4332880 | 40913.3 |
| lysr family transcriptional regulator | APR52_20125 | Not Available | Negative | 4332896 - 4333861 | 34322.1 |
| gcn5 family acetyltransferase | APR52_20130 | Not Available | Positive | 4333910 - 4334440 | 19354.3 |
| mfs transporter | APR52_20135 | Not Available | Positive | 4334440 - 4335684 | 43195.2 |
| tautomerase | APR52_20140 | Not Available | Negative | 4335691 - 4336083 | 14477.4 |
| hypothetical protein | APR52_20145 | B4UIV1 | Negative | 4336085 - 4337422 | 46245.7 |
| hydratase | APR52_20150 | Q9UYV8 | Negative | 4337419 - 4338300 | 31679.8 |
| transcriptional regulator | APR52_20155 | P9WMG3 | Positive | 4338583 - 4339053 | 17287.0 |
| hypothetical protein | APR52_20160 | Not Available | Negative | 4339066 - 4341432 | 86143.5 |
| Trna-thr | Not Available | Not Available | Positive | 4341444 - 4341518 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
