Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-acp synthase | APR52_20020 | C5CSE2 | Negative | 4308723 - 4309700 | 34101.1 |
| phosphate acyltransferase | APR52_20025 | A9BNK7 | Negative | 4309713 - 4310732 | 35449.6 |
| 50s ribosomal protein l32 | APR52_20030 | A1TLD5 | Negative | 4310863 - 4311045 | 6642.96 |
| hypothetical protein | APR52_20035 | Not Available | Negative | 4311214 - 4311771 | 20317.7 |
| septum formation inhibitor maf | APR52_20040 | Q21XP8 | Positive | 4311853 - 4312434 | 20737.0 |
| ribosomal rna small subunit methyltransferase i | APR52_20045 | Q9KGL2 | Positive | 4312431 - 4313195 | 27015.7 |
| mfs transporter | APR52_20050 | Q7CH99 | Positive | 4313198 - 4314352 | 38791.0 |
| peptidase s49 | APR52_20055 | Q58067 | Negative | 4314366 - 4315409 | 37710.9 |
| 2fe-2s ferredoxin | APR52_20060 | Not Available | Negative | 4315452 - 4315820 | 13416.7 |
| had family hydrolase | APR52_20065 | Not Available | Negative | 4315838 - 4316518 | 24966.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
