Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor 4 | APR52_19970 | C5CSF2 | Negative | 4298370 - 4300181 | 66323.2 |
| serine peptidase | APR52_19975 | B0KV30 | Negative | 4300705 - 4302180 | 51840.2 |
| transcriptional regulator | APR52_19980 | Not Available | Negative | 4302269 - 4303345 | 39579.9 |
| anti-sigma factor | APR52_19985 | Not Available | Negative | 4303374 - 4304030 | 22934.1 |
| rna polymerase subunit sigma | APR52_19990 | Q06198 | Negative | 4304050 - 4304721 | 25044.7 |
| hypothetical protein | APR52_19995 | Not Available | Negative | 4304735 - 4305232 | 17748.3 |
| 3-oxoacyl-acp synthase | APR52_20000 | P0AAI7 | Negative | 4305246 - 4306490 | 43509.8 |
| acyl carrier protein | APR52_20005 | C5CSE5 | Negative | 4306590 - 4306829 | 8643.06 |
| 3-ketoacyl-acp reductase | APR52_20010 | P0AEK2 | Negative | 4306931 - 4307674 | 25696.1 |
| acp s-malonyltransferase | APR52_20015 | O85140 | Negative | 4307707 - 4308660 | 32476.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
