Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_19920 | Not Available | Negative | 4290081 - 4290755 | 25632.5 |
| galactosyl transferase gma12/mnn10 family protein | APR52_19925 | Not Available | Negative | 4290881 - 4292230 | 50108.1 |
| beta-hexosaminidase | APR52_19930 | Q2KXM7 | Negative | 4292277 - 4293365 | 39528.4 |
| acp synthase | APR52_19935 | C5CSF9 | Negative | 4293362 - 4293769 | 15314.5 |
| pyridoxine 5'-phosphate synthase | APR52_19940 | Q21XM2 | Negative | 4293766 - 4294542 | 27638.7 |
| dna repair protein reco | APR52_19945 | C5CSF7 | Negative | 4294539 - 4295312 | 27879.6 |
| gtpase era | APR52_19950 | Q8Y0I0 | Negative | 4295314 - 4296288 | 35987.4 |
| ribonuclease iii | APR52_19955 | C5CSF5 | Negative | 4296296 - 4296982 | 24615.8 |
| hypothetical protein | APR52_19960 | Not Available | Negative | 4297000 - 4297368 | 13393.4 |
| signal peptidase | APR52_19965 | P26844 | Negative | 4297399 - 4298364 | 35871.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
