Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase | APR52_01325 | Q2LTA1 | Positive | 285494 - 286393 | 32333.2 |
| methyltransferase | APR52_01330 | Not Available | Negative | 286432 - 287112 | 24298.0 |
| oxidoreductase | APR52_01335 | P39577 | Negative | 287147 - 287902 | 27335.8 |
| arac family transcriptional regulator | APR52_01340 | P49322 | Negative | 288139 - 289113 | 35144.0 |
| hypothetical protein | APR52_01345 | Not Available | Positive | 289265 - 290200 | 34733.8 |
| hypothetical protein | APR52_01350 | Not Available | Negative | 290214 - 291380 | 40810.8 |
| multidrug mfs transporter | APR52_01355 | Q6NAM1 | Negative | 291381 - 292271 | 33032.6 |
| hypothetical protein | APR52_01360 | A6TM69 | Negative | 292268 - 293083 | 28337.4 |
| hypothetical protein | APR52_01365 | Not Available | Negative | 293076 - 293894 | 28355.4 |
| fad-dependent oxidoreductase | APR52_01370 | Not Available | Negative | 293891 - 295333 | 52001.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
