Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tryptophan synthase subunit beta | APR52_19865 | A1VRR7 | Positive | 4279591 - 4280868 | 45650.3 |
| tryptophan synthase subunit alpha | APR52_19870 | B9MDL9 | Positive | 4280868 - 4281713 | 29444.7 |
| acetyl-coa carboxylase subunit beta | APR52_19875 | B2JQF1 | Positive | 4281818 - 4282690 | 31718.6 |
| hypothetical protein | APR52_19880 | P64566 | Negative | 4282768 - 4283322 | 20149.1 |
| peptidase s16 | APR52_19885 | Not Available | Positive | 4283348 - 4284025 | 24943.5 |
| lysine--trna ligase | APR52_19890 | C5CSG3 | Positive | 4284200 - 4285750 | 58140.3 |
| heat-shock protein | APR52_19895 | P36928 | Positive | 4285747 - 4287006 | 45230.0 |
| metal-dependent hydrolase | APR52_19900 | P42597 | Positive | 4287043 - 4287591 | 20938.3 |
| hypothetical protein | APR52_19910 | Not Available | Positive | 4288391 - 4289251 | 32201.7 |
| hypothetical protein | APR52_19915 | Not Available | Negative | 4289252 - 4290067 | 30534.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
