Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron transporter feoa | APR52_19810 | Not Available | Negative | 4267419 - 4267733 | 11031.2 |
| iron transporter | APR52_19815 | Q8XAS6 | Negative | 4267887 - 4268675 | 28935.4 |
| peroxidase | APR52_19820 | Q31Z86 | Negative | 4268780 - 4270096 | 47221.0 |
| multidrug dmt transporter permease | APR52_19825 | P0AB24 | Negative | 4270119 - 4271309 | 42507.6 |
| iron transporter | APR52_19830 | Q1C8M3 | Negative | 4271320 - 4272153 | 29306.7 |
| phosphodiesterase | APR52_19835 | Not Available | Negative | 4272322 - 4272783 | 16077.5 |
| aconitate hydratase | APR52_19840 | Q9RTN7 | Negative | 4272789 - 4275665 | 103485.0 |
| hypothetical protein | APR52_19845 | Not Available | Negative | 4275857 - 4276282 | 14386.0 |
| trna pseudouridine synthase a | APR52_19855 | C5CSH0 | Positive | 4278032 - 4278844 | 30071.6 |
| n-(5'-phosphoribosyl)anthranilate isomerase | APR52_19860 | A2SHS5 | Positive | 4278841 - 4279542 | 24117.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
