Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | APR52_19760 | A1TLB7 | Positive | 4257955 - 4258890 | 34920.5 |
| fe-s oxidoreductase | APR52_19765 | Not Available | Positive | 4258928 - 4259245 | 11282.3 |
| asnc family transcriptional regulator | APR52_19770 | P56901 | Negative | 4259246 - 4259722 | 17488.2 |
| kynurenine formamidase | APR52_19775 | A1TLB1 | Positive | 4259934 - 4260572 | 22725.3 |
| kynureninase | APR52_19780 | A3NS56 | Positive | 4260586 - 4261866 | 46335.1 |
| tryptophan 2,3-dioxygenase | APR52_19785 | A1VRP1 | Positive | 4261863 - 4262711 | 32491.0 |
| hypothetical protein | APR52_19790 | Not Available | Positive | 4262793 - 4264043 | 44664.1 |
| fad-dependent oxidoreductase | APR52_19795 | Q3S4B7 | Negative | 4264040 - 4265224 | 40944.9 |
| hypothetical protein | APR52_19800 | Not Available | Negative | 4265230 - 4265505 | 9319.97 |
| iron transporter feob | APR52_19805 | Q72SI0 | Negative | 4265531 - 4267426 | 67622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
