Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | APR52_19710 | Not Available | Positive | 4249384 - 4250394 | 35732.1 |
| rna polymerase subunit sigma-24 | APR52_19715 | Not Available | Negative | 4250396 - 4251682 | 46374.0 |
| transcription initiation protein | APR52_19720 | Not Available | Negative | 4251687 - 4252115 | 15305.4 |
| dehydrogenase | APR52_19725 | Not Available | Negative | 4252132 - 4252563 | 15923.1 |
| glyoxalase | APR52_19730 | Not Available | Negative | 4252723 - 4253148 | 15391.5 |
| transglutaminase | APR52_19735 | Q87DH6 | Negative | 4253148 - 4254002 | 31692.8 |
| hypothetical protein | APR52_19740 | B4E9G3 | Negative | 4254091 - 4255644 | 55236.5 |
| 30s ribosomal protein s20 | APR52_19745 | C5CSK7 | Positive | 4255761 - 4256075 | 11245.7 |
| hypothetical protein | APR52_19750 | Not Available | Negative | 4256214 - 4256579 | 13322.8 |
| acetylornithine aminotransferase | APR52_19755 | Q7WKW5 | Positive | 4256750 - 4257958 | 42909.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
