Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | APR52_19660 | Not Available | Negative | 4239184 - 4240476 | 45302.8 |
| inorganic phosphate transporter | APR52_19665 | O30499 | Negative | 4240898 - 4241908 | 35295.7 |
| phosphate transport regulator | APR52_19670 | O34454 | Negative | 4241922 - 4242566 | 24687.4 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | APR52_19675 | Q9HV71 | Negative | 4242768 - 4243229 | 16248.6 |
| poly(a) polymerase | APR52_19680 | Q8Z9C3 | Negative | 4243484 - 4245094 | 59319.8 |
| dnaa regulatory inactivator hda | APR52_19685 | O86235 | Negative | 4245114 - 4245815 | 25630.8 |
| phosphoribosylaminoimidazole synthetase | APR52_19690 | Q126R8 | Positive | 4245944 - 4246984 | 35961.6 |
| permease | APR52_19695 | Not Available | Positive | 4247020 - 4248090 | 38265.4 |
| hydrolase | APR52_19700 | Not Available | Positive | 4248219 - 4248776 | 19777.5 |
| thiamine biosynthesis protein thij | APR52_19705 | Not Available | Positive | 4248773 - 4249405 | 22238.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
