Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtpase rsga | APR52_19610 | C5CSN3 | Positive | 4231756 - 4232709 | 34704.2 |
| histidinol-phosphate aminotransferase | APR52_19615 | A9H311 | Negative | 4232703 - 4233812 | 40897.9 |
| cobalamin biosynthesis protein cbib | APR52_19620 | A4VJ38 | Negative | 4233817 - 4234818 | 36431.0 |
| dna mismatch repair protein mutt | APR52_19625 | Q0T506 | Negative | 4234902 - 4235627 | 25997.0 |
| 50s ribosomal protein l19 | APR52_19630 | A1TND3 | Negative | 4235763 - 4236143 | 13995.9 |
| trna (guanine-n1)-methyltransferase | APR52_19635 | A1TND2 | Negative | 4236254 - 4237000 | 27150.5 |
| 16s rrna processing protein rimm | APR52_19640 | A1TND1 | Negative | 4237030 - 4237584 | 19951.7 |
| 30s ribosomal protein s16 | APR52_19645 | C5CSM6 | Negative | 4237603 - 4237866 | 9670.72 |
| gcn5 family acetyltransferase | APR52_19650 | P31668 | Positive | 4238084 - 4238605 | 18456.0 |
| hypothetical protein | APR52_19655 | Not Available | Positive | 4238637 - 4239083 | 16364.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
