Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin amidase | APR52_19510 | P07941 | Negative | 4207341 - 4209800 | 88408.4 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_19515 | Not Available | Negative | 4209824 - 4210990 | 40809.2 |
| short-chain dehydrogenase | APR52_19520 | Q9KJF1 | Negative | 4211043 - 4211774 | 25449.9 |
| cyclase | APR52_19525 | A0NLY7 | Negative | 4211771 - 4212583 | 29452.9 |
| short-chain dehydrogenase | APR52_19530 | Not Available | Negative | 4212616 - 4213872 | 45432.6 |
| acetyl-coa acetyltransferase | APR52_19535 | Not Available | Negative | 4213869 - 4215047 | 42304.2 |
| atp-dependent acyl-coa ligase | APR52_19540 | B5FHG5 | Negative | 4215249 - 4216877 | 58788.1 |
| phenylpropionate dioxygenase | APR52_19545 | Not Available | Negative | 4216894 - 4217379 | 19022.6 |
| oxidoreductase | APR52_19550 | Q46372 | Negative | 4217379 - 4218695 | 49203.3 |
| ferredoxin | APR52_19555 | O24840 | Negative | 4218713 - 4219699 | 35518.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
