Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | APR52_19460 | Not Available | Negative | 4196559 - 4197089 | 20068.1 |
| 3-hydroxyacyl-coa dehydrogenase | APR52_19465 | P16544 | Negative | 4197086 - 4197865 | 26560.7 |
| atp-dependent acyl-coa ligase | APR52_19470 | Q53005 | Negative | 4197928 - 4199508 | 56517.7 |
| abc transporter atp-binding protein | APR52_19475 | Not Available | Negative | 4199498 - 4200238 | 26438.0 |
| hypothetical protein | APR52_19480 | Not Available | Negative | 4200235 - 4201989 | 61574.6 |
| abc transporter permease | APR52_19485 | Not Available | Negative | 4202016 - 4203071 | 36288.7 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_19490 | Not Available | Negative | 4203147 - 4204307 | 40648.4 |
| aromatic-ring-hydroxylating dioxygenase | APR52_19495 | Not Available | Negative | 4204355 - 4204819 | 17627.1 |
| oxidoreductase | APR52_19500 | A8A344 | Negative | 4204816 - 4206147 | 49394.6 |
| branched-chain amino acid abc transporter substrate-binding protein | APR52_19505 | Q8YEE8 | Negative | 4206170 - 4207267 | 37958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
