Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | APR52_01275 | Not Available | Negative | 273545 - 274456 | 34323.7 |
| hypothetical protein | APR52_01280 | P20667 | Negative | 274597 - 275490 | 32432.3 |
| mfs transporter | APR52_01285 | Not Available | Negative | 275598 - 277262 | 58830.4 |
| hypothetical protein | APR52_01290 | Not Available | Negative | 277303 - 278058 | 25523.7 |
| hypothetical protein | APR52_01295 | Not Available | Positive | 278314 - 279534 | 42839.2 |
| amidase | APR52_01300 | P63495 | Positive | 279634 - 281112 | 52749.9 |
| phosphohydrolase | APR52_01305 | Not Available | Negative | 281122 - 281793 | 24632.4 |
| hypothetical protein | APR52_01310 | Not Available | Positive | 282066 - 282683 | 21009.2 |
| mfs transporter | APR52_01315 | Not Available | Positive | 282776 - 284452 | 59885.8 |
| lysr family transcriptional regulator | APR52_01320 | Not Available | Positive | 284529 - 285449 | 34079.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
