Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase | APR52_19195 | Not Available | Negative | 4136748 - 4136885 | 5118.24 |
| cytochrome c oxidase cbb3 | APR52_19200 | Not Available | Negative | 4136908 - 4137537 | 23516.3 |
| cytochrome c oxidase cbb3 | APR52_19205 | D9IA43 | Negative | 4137547 - 4138986 | 53555.3 |
| cytochrome oxidase | APR52_19210 | Not Available | Negative | 4139052 - 4139189 | 5106.32 |
| atpase p | APR52_19215 | Q59207 | Negative | 4139189 - 4141513 | 83599.9 |
| universal stress protein uspa | APR52_19220 | P42297 | Positive | 4141619 - 4142062 | 15872.3 |
| hypothetical protein | APR52_19225 | Not Available | Positive | 4144239 - 4144487 | 8470.69 |
| alpha/beta hydrolase | APR52_19230 | O31581 | Positive | 4144599 - 4145465 | 31700.2 |
| hemerythrin | APR52_19235 | Not Available | Positive | 4146548 - 4147036 | 18355.8 |
| hypothetical protein | APR52_19240 | Not Available | Positive | 4148018 - 4148221 | 7506.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
