Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| universal stress protein uspa | APR52_19145 | Not Available | Negative | 4128329 - 4129153 | 30033.1 |
| oleate hydratase | APR52_19150 | C7DLJ6 | Positive | 4129403 - 4130983 | 58646.2 |
| hypothetical protein | APR52_19155 | Not Available | Positive | 4131079 - 4131273 | 6761.56 |
| hypothetical protein | APR52_19160 | Not Available | Positive | 4131444 - 4131710 | 9468.32 |
| hypothetical protein | APR52_19165 | Not Available | Negative | 4131679 - 4132383 | 23951.8 |
| coproporphyrinogen iii oxidase | APR52_19170 | O34162 | Negative | 4132386 - 4133762 | 51407.8 |
| hypothetical protein | APR52_19175 | Not Available | Negative | 4133789 - 4134058 | 9521.7 |
| nitrogen fixation protein fixh | APR52_19180 | Not Available | Negative | 4134055 - 4134330 | 10126.2 |
| cytochrome c oxidase | APR52_19185 | Q01854 | Negative | 4134382 - 4135794 | 53618.8 |
| cytochrome oxidase subunit iii | APR52_19190 | Q5GCA5 | Negative | 4135817 - 4136734 | 32934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
