Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_19095 | Not Available | Negative | 4116881 - 4117294 | 14217.3 |
| phosphoketolase | APR52_19100 | Not Available | Positive | 4117491 - 4119860 | 88029.9 |
| two-component system response regulator | APR52_19105 | Q9HUI2 | Positive | 4119966 - 4120694 | 26547.0 |
| histidine kinase | APR52_19110 | Q881J7 | Positive | 4120687 - 4122804 | 76046.1 |
| crp/fnr family transcriptional regulator | APR52_19115 | P0A2T9 | Negative | 4122826 - 4123593 | 27772.6 |
| ornithine carbamoyltransferase | APR52_19120 | A3N1W5 | Positive | 4123830 - 4124336 | 17861.7 |
| osmy domain-containing protein | APR52_19125 | Not Available | Positive | 4124476 - 4125129 | 23629.3 |
| acetoacetyl-coa reductase | APR52_19130 | P50205 | Positive | 4125132 - 4125851 | 24546.6 |
| alcohol dehydrogenase | APR52_19135 | P9WQC0 | Positive | 4125998 - 4126945 | 33456.4 |
| mrna 3'-end processing factor | APR52_19140 | Q5SLP1 | Negative | 4126968 - 4128320 | 49495.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
