Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_19040 | Not Available | Positive | 4110305 - 4110721 | 14250.2 |
| hypothetical protein | APR52_19045 | E1VBK4 | Negative | 4110889 - 4111395 | 18148.7 |
| abc transporter atp-binding protein | APR52_19050 | Q6N999 | Negative | 4111647 - 4112330 | 24841.1 |
| hypothetical protein | APR52_19060 | Not Available | Negative | 4113164 - 4113598 | 14889.1 |
| universal stress protein uspa | APR52_19065 | Not Available | Positive | 4113857 - 4114315 | 16165.4 |
| hypothetical protein | APR52_19070 | Not Available | Positive | 4114378 - 4114989 | 20784.0 |
| transporter | APR52_19075 | Not Available | Positive | 4115022 - 4115267 | 8857.61 |
| hypothetical protein | APR52_19080 | P13800 | Positive | 4115409 - 4116194 | 28452.4 |
| hypothetical protein | APR52_19085 | Not Available | Negative | 4116204 - 4116473 | 9665.7 |
| hypothetical protein | APR52_19090 | Not Available | Negative | 4116482 - 4116694 | 7588.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
