Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_18980 | Not Available | Negative | 4099581 - 4100537 | 34421.0 |
| hypothetical protein | APR52_18985 | Not Available | Negative | 4100562 - 4100948 | 13393.8 |
| aminotransferase | APR52_18990 | Q9FV68 | Negative | 4100974 - 4102158 | 44438.9 |
| heat-shock protein hsp20 | APR52_19000 | P81958 | Positive | 4102917 - 4103342 | 15979.0 |
| cation/acetate symporter actp | APR52_19010 | A8AN31 | Negative | 4104374 - 4106110 | 60331.4 |
| hypothetical protein | APR52_19015 | Not Available | Negative | 4106107 - 4106427 | 11956.8 |
| amp-dependent synthetase | APR52_19020 | Q39EK2 | Positive | 4106569 - 4108545 | 71389.9 |
| mbl fold metallo-hydrolase | APR52_19025 | Q3JRV4 | Negative | 4108556 - 4109449 | 32575.8 |
| arsr family transcriptional regulator | APR52_19030 | Q8UAA8 | Positive | 4109538 - 4109861 | 11830.6 |
| yeee/yede | APR52_19035 | Q87AD4 | Positive | 4109861 - 4110295 | 14704.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
