Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | APR52_01225 | Not Available | Positive | 260105 - 261580 | 53819.6 |
| extensin | APR52_01230 | Not Available | Positive | 261700 - 262443 | 26729.0 |
| hypothetical protein | APR52_01235 | Not Available | Positive | 262466 - 263593 | 39682.8 |
| hypothetical protein | APR52_01240 | Not Available | Negative | 263609 - 264241 | 22711.2 |
| aaa family atpase | APR52_01245 | Not Available | Positive | 264376 - 266037 | 61473.8 |
| esterase | APR52_01250 | Not Available | Positive | 266076 - 266750 | 24026.7 |
| rrna methyltransferase | APR52_01255 | Q5P119 | Negative | 267126 - 268193 | 39142.4 |
| excinuclease abc subunit a | APR52_01260 | P52087 | Negative | 268272 - 270800 | 90501.5 |
| cardiolipin synthase | APR52_01265 | Q81V75 | Positive | 270917 - 272206 | 47576.9 |
| aminotransferase | APR52_01270 | O53379 | Negative | 272217 - 273536 | 47521.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
