Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_18820 | Not Available | Negative | 4070000 - 4070650 | 23763.7 |
| long-chain fatty acid--coa ligase | APR52_18830 | Not Available | Negative | 4071588 - 4072277 | 25179.9 |
| long-chain acyl-coa synthetase | APR52_18835 | B2HGV4 | Negative | 4072274 - 4073743 | 51173.6 |
| hypothetical protein | APR52_18840 | Not Available | Negative | 4073740 - 4074390 | 23293.1 |
| iron permease | APR52_18845 | Not Available | Negative | 4074542 - 4074847 | 10781.8 |
| ntp pyrophosphohydrolase | APR52_18850 | Not Available | Negative | 4075099 - 4075590 | 18144.7 |
| trypsin | APR52_18855 | A6VUA4 | Negative | 4075587 - 4077017 | 48967.5 |
| universal stress protein uspa | APR52_18860 | Not Available | Negative | 4077018 - 4077440 | 15183.4 |
| flavodoxin | APR52_18865 | Not Available | Positive | 4077643 - 4078176 | 18934.8 |
| peptidase | APR52_18870 | F6AA62 | Positive | 4078400 - 4079683 | 45502.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
