Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase | APR52_18770 | Not Available | Positive | 4060175 - 4061158 | 34497.4 |
| glutathione s-transferase | APR52_18775 | P57109 | Positive | 4061176 - 4061955 | 29065.9 |
| gntr family transcriptional regulator | APR52_18780 | Not Available | Positive | 4062005 - 4062688 | 25274.3 |
| twitching motility protein pilt | APR52_18785 | P9WF72 | Negative | 4063233 - 4063613 | 14131.3 |
| hypothetical protein | APR52_18790 | Not Available | Positive | 4064260 - 4065639 | 51036.0 |
| hypothetical protein | APR52_18795 | Not Available | Positive | 4065632 - 4066000 | 13604.4 |
| hypothetical protein | APR52_18800 | Not Available | Negative | 4066170 - 4066424 | 9070.92 |
| hypothetical protein | APR52_18805 | Q9P6J2 | Positive | 4067180 - 4067884 | 23901.6 |
| two-component system response regulator | APR52_18810 | P66796 | Positive | 4067951 - 4068625 | 24627.6 |
| histidine kinase | APR52_18815 | Q8Z3P2 | Positive | 4068622 - 4069977 | 50218.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
