Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain H061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1486103 bp
Thymine Count
1481906 bp
Guanine Count
3332923 bp
Cytosine Count
3325138 bp
Genome Length
9626070 bp
Protein-coding Genes
8481 genes
Non-Coding Genes
143 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | APR52_18720 | Not Available | Negative | 4049734 - 4050648 | 32209.4 |
| hypothetical protein | APR52_18725 | Q54YT4 | Negative | 4050723 - 4051463 | 26207.8 |
| hypothetical protein | APR52_18730 | Not Available | Positive | 4051482 - 4051751 | 10256.1 |
| hypothetical protein | APR52_18735 | O34812 | Negative | 4051766 - 4052779 | 35180.5 |
| 3-hydroxybutyryl-coa dehydratase | APR52_18740 | Not Available | Negative | 4053398 - 4054174 | 28147.0 |
| enoyl-coa hydratase | APR52_18745 | Not Available | Negative | 4054171 - 4054989 | 28860.7 |
| coa-transferase | APR52_18750 | Not Available | Negative | 4054986 - 4056179 | 43206.8 |
| abc transporter | APR52_18755 | Q1AS06 | Negative | 4056203 - 4057261 | 37895.7 |
| abc transporter permease | APR52_18760 | Not Available | Negative | 4057292 - 4059022 | 61725.6 |
| abc transporter substrate-binding protein | APR52_18765 | Not Available | Negative | 4059006 - 4060049 | 37532.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
